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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906843.1_cds_XP_016457036.1_50807
CDS Infomation

[gene=LOC107780923] [db_xref=GeneID:107780923] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2] [protein_id=XP_016457036.1] [location=complement(join(15284..15651,15753..17900,32966..33020))] [gbkey=CDS]
Sequence

ATGTGGAACATGTCAAAGCTTGAAGATATGTTTCTTGGATGGAATAACTTGTCAGGAATC
ATACCAAGCGAAATTCAGTATCTTCCAACGATTCAAAGACTAAGTCTTCGACGGAACAGT
TTGGTGGGAACTCTTCCACCTTCTATGGGGAATTTATCGACTGTGGCAGTAATAGATATT
GGTGAAAATAGTCTTCATGGAAATATTCCTACACAACTTGGAAATCTTGGTAATCTGAAA
GAAATATATCTAGGCTCAAACAAGATATCAGGTCAAATTCCTAGCTCTTTCTACAACATT
TCTGGTTTAGAAATAATTGCACTTGCAGCTAATCAATTGTCTGGAACTCTACCTCCTAAT
ATTGGCCATTGCTTTCCAAATCTTAATGGACTTTTTCTTGGGGTGAACCAGTTTAGTGGG
AGAATTCCTGCCTCTATTTCCAATGTCTCGAAGCTCATTTACCTTGATCTTGGACGCAAT
TTGCTTACTGGGGATGTACCGATGAATCTTGGAAACTTACAGCAGCTTAAAGTGATTAAC
TTGCAATTGAATCAATTGACAAATGATCCCTCTACGGGGGAATTAAGTTTCCTTACTCCT
CTCTCAAATTGCAAGAACTTGGAGGGAATACAAATAGGAATTAATGCATTTAGTGGAAAA
TTTCCAAAGTCCTTAGCCTTTGGTAATTGGTCTGATTCTCTTGAAAGGTTCAATGCTTTT
CGATGTGGCATCACTGGTGAAATCCCTCTTGAAATCAGTAAGTTGAGTAAGTTGACGTGG
TTAAGCATTGGAAAGAATGAATTGATAGGTTCAATTCCTCAGGAATTTGGGAACATGAGG
AAATTGCAGAAGCTGGTATTTTCGGAAAACAAAATAAACGGTACCATACCAGAAAGCTTA
TGCAATATGGAGGTCTTATTTCTACTTGACTTGAGTGAAAATCACCTTTCTGGGGAAATA
CCAATTTGTTTGGGGAATCTTTCTTCTTTAAGAGAAGTTTATTTACATTCAAATGCATTG
AGTTCCAATATTCCACCAACTTTTTGGAGTACTAACAGGGCAATATCAGTTCTGAGTTTG
TCCTCCAATTTTCTCAATGGTTCTTTGCCATTCGAAATAGGAAGTTTGAGGAGTCTTAGT
GATTTAGATTTATCAAGAAATCAATTCATAGGACAAATTCCAAGCACAATTGGACAGCTA
CAAAATTTGGTGAATCTTTCACTGTCAATGAATAATTTTGAAGGTCACATACCTGAATCA
TTCGGAGACTTGGTTTCTCTTGCATACTTGGATCTATCCGGAAATAACCTTTCTGGCATG
ATCCCTGAATCTTTGGTGAATCTTCAACGGCTCAGCTATCTTAATGTGTCTTTCAATATA
CTCACTGGTGAGATTCCAAATGTAGGACCTTTTAAAAGCTTGACAGCTGAATCTTTCATG
GGTAACGCCGCATTGTGTGGACCATCTCAATTCAATGTGGTGAAATGCAGAATCAATAGC
CCGAAAAGTAGAAAGAAGAGAAGGGCTTTAACTTTTGTTCTTGCATCAATTGCAGTAGCA
TTAGTAGTCGCAACCATTTTCATGGTTTGGTTTCTGAAATATCGAAAAAGAAATAGACAA
CTTGCTATACCAGATTTGATTGGTCAATCCCATAAGAGGATCTCTTACTATGAAGTTGTT
CGAGGGACAAACAACTTTGATGAAGCCAACTTGATTGGCAGGGGAGGCCTTGGTTTAGTA
TACAGAGGAACACTCCTAGATGGAAATATGGTCGCTGTAAAGGTTTTCAATACAGAAGTA
GAAGATGCATTCAAAAGGTTTGATTTGGAGTGTGAGGTTTTGCGTAACATTCGCCATAGA
AATCTTGTTAAGGTGATAAGTAGTTGTGCTAACCTTGATTTTAAAGCGTTGGTGCTTGAG
TACATGCCAAATGGAAACCTCGATACATGGCTTTACTCTCACAACAATTTTTTGGATTTG
ATCCAAAGATTGAAGATCATGATTGATGTGGCTTTTGCAATGGAATATTTGCATGAAGGT
CATTCTTTTGTTGTCGTCCATTGTGATCTAAAACCAAGTAACATACTTTTGGACGGAGAC
ATGGTTGCAAGAGTCAGTGACTTTGGTATATCCAAACTTATGACACCAGATAAAATGATA
GCACAAACCAAGACGTTAGGCACTATTGGCTACATGGCACCAGAATATGGATCGAAAGGC
TTAGTGTCAACTATGGGAGATGTTTACAGCTATGGTATCTTGTTAATGGAGACCTTTACA
AGAAAGAAGCCCACGGACGATCTCTTCGTTGAAGAACTCAGCTTGAAGAGATGGGTGTTT
GAAGCATTCCCTGATAGAGTGGTAGATGTTGTGGATGCTAATCTATTTTCAAGAGAAGAT
GAGCAGTTTTCTTCCAAAGAGACTTGCTTTAAGTTGCTAATGGAATTAGCCTTACATTGC
ACAGCTGAATTGCCTCAAGATCGAATCAGCATGAAACATGTCCTTGTAAGACTCAACAAG
ATACTAACTCAGTTTTTGCAAAGTGCAACAGCAACCCAAAATGGAAATTAG

Peptide Sequence

PEP ID

XP_016457036.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X2 [Nicotiana tabacum]
Sequence

MWNMSKLEDMFLGWNNLSGIIPSEIQYLPTIQRLSLRRNSLVGTLPPSMGNLSTVAVIDI
GENSLHGNIPTQLGNLGNLKEIYLGSNKISGQIPSSFYNISGLEIIALAANQLSGTLPPN
IGHCFPNLNGLFLGVNQFSGRIPASISNVSKLIYLDLGRNLLTGDVPMNLGNLQQLKVIN
LQLNQLTNDPSTGELSFLTPLSNCKNLEGIQIGINAFSGKFPKSLAFGNWSDSLERFNAF
RCGITGEIPLEISKLSKLTWLSIGKNELIGSIPQEFGNMRKLQKLVFSENKINGTIPESL
CNMEVLFLLDLSENHLSGEIPICLGNLSSLREVYLHSNALSSNIPPTFWSTNRAISVLSL
SSNFLNGSLPFEIGSLRSLSDLDLSRNQFIGQIPSTIGQLQNLVNLSLSMNNFEGHIPES
FGDLVSLAYLDLSGNNLSGMIPESLVNLQRLSYLNVSFNILTGEIPNVGPFKSLTAESFM
GNAALCGPSQFNVVKCRINSPKSRKKRRALTFVLASIAVALVVATIFMVWFLKYRKRNRQ
LAIPDLIGQSHKRISYYEVVRGTNNFDEANLIGRGGLGLVYRGTLLDGNMVAVKVFNTEV
EDAFKRFDLECEVLRNIRHRNLVKVISSCANLDFKALVLEYMPNGNLDTWLYSHNNFLDL
IQRLKIMIDVAFAMEYLHEGHSFVVVHCDLKPSNILLDGDMVARVSDFGISKLMTPDKMI
AQTKTLGTIGYMAPEYGSKGLVSTMGDVYSYGILLMETFTRKKPTDDLFVEELSLKRWVF
EAFPDRVVDVVDANLFSREDEQFSSKETCFKLLMELALHCTAELPQDRISMKHVLVRLNK
ILTQFLQSATATQNGN

Transcript Sequence

Gene sequence data has not been registered.